Resolution: 9.3 Å
EM Method: Single-particle
Fitted PDBs: 5m5i, 5m5l, 5m5m, 5m5n, 5m5o
Q-score: 0.0885
Britto M, Goulet A, Rizvi S, von Loeffelholz O, Moores CA, Cross RA
PNAS (2016) 113 pp. E7483-E7489 [ Pubmed: 27834216 DOI: doi:10.1073/pnas.1611581113 ]
- Microtubule-bound s.pombe kinesin-5 motor domain in the amppnp state (140 kDa, Complex)
- Magnesium ion (24 Da, Ligand)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Tubulin alpha-1d chain (50 kDa, Protein from Bovine)
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
- Tubulin beta-2b chain (49 kDa, Protein from Bovine)
- Kinesin-like protein cut7 (40 kDa, Protein from Schizosaccharomyces pombe (strain 972 / ATCC 24843))
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Taxol (853 Da, Ligand)
GDP-microtubule complexed with nucleotide-free KIF5C
Resolution: 5.35 Å
EM Method: Helical reconstruction
Fitted PDBs: 5xxt
Q-score: 0.182
Shima T, Morikawa M, Kaneshiro J, Kambara T, Kamimura S, Yagi T, Iwamoto H, Uemura S, Shigematsu H, Shirouzu M, Ichimura T, Watanabe TM, Nitta R, Okada Y, Hirokawa N
J Cell Biol (2018) 217 pp. 4164-4183 [ DOI: doi:10.1083/jcb.201711178 Pubmed: 30297389 ]
- Tubulin alpha-1a chain (48 kDa, Protein from Pig)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Water (18 Da, Ligand)
- Tubulin beta chain (47 kDa, Protein from Pig)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Gdp-microtubule complexed with nucleotide-free kif5c (Cellular component from Mus musculus)
GDP-microtubule complexed with KIF5C in AMPPNP state
Resolution: 6.46 Å
EM Method: Helical reconstruction
Fitted PDBs: 5xxv
Q-score: 0.149
Shima T, Morikawa M, Kaneshiro J, Kambara T, Kamimura S, Yagi T, Iwamoto H, Uemura S, Shigematsu H, Shirouzu M, Ichimura T, Watanabe TM, Nitta R, Okada Y, Hirokawa N
J Cell Biol (2018) 217 pp. 4164-4183 [ DOI: doi:10.1083/jcb.201711178 Pubmed: 30297389 ]
- Tubulin alpha-1a chain (48 kDa, Protein from Pig)
- Magnesium ion (24 Da, Ligand)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Water (18 Da, Ligand)
- Gdp-microtubule complexed with kif5c in amppnp state (Cellular component from Mus musculus)
- Tubulin beta chain (47 kDa, Protein from Pig)
- Guanosine-5'-diphosphate (443 Da, Ligand)
GDP-microtubule complexed with KIF5C in ATP state
Resolution: 6.0 Å
EM Method: Helical reconstruction
Fitted PDBs: 5xxw
Q-score: 0.164
Shima T, Morikawa M, Kaneshiro J, Kambara T, Kamimura S, Yagi T, Iwamoto H, Uemura S, Shigematsu H, Shirouzu M, Ichimura T, Watanabe TM, Nitta R, Okada Y, Hirokawa N
J Cell Biol (2018) 217 pp. 4164-4183 [ DOI: doi:10.1083/jcb.201711178 Pubmed: 30297389 ]
- Tubulin alpha-1a chain (48 kDa, Protein from Pig)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Water (18 Da, Ligand)
- Tubulin beta chain (47 kDa, Protein from Pig)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Gdp-microtubule complexed with kif5c in atp state (Cellular component from Mus musculus)
GMPCPP-microtubule complexed with nucleotide-free KIF5C
Resolution: 6.43 Å
EM Method: Helical reconstruction
Fitted PDBs: 5xxx
Q-score: 0.154
Shima T, Morikawa M, Kaneshiro J, Kambara T, Kamimura S, Yagi T, Iwamoto H, Uemura S, Shigematsu H, Shirouzu M, Ichimura T, Watanabe TM, Nitta R, Okada Y, Hirokawa N
J Cell Biol (2018) 217 pp. 4164-4183 [ DOI: doi:10.1083/jcb.201711178 Pubmed: 30297389 ]
- Tubulin alpha-1a chain (48 kDa, Protein from Pig)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Water (18 Da, Ligand)
- Phosphomethylphosphonic acid guanylate ester (521 Da, Ligand)
- Gmpcpp-microtubule complexed with nucleotide-free kif5c (Cellular component from Mus musculus)
- Tubulin beta chain (47 kDa, Protein from Pig)
Kinesin-8 motor, KIF19A, in the nucleotide-free state complexed with GDP-taxol microtubule
Resolution: 7.0 Å
EM Method: Helical reconstruction
Fitted PDBs: 5gsy
Q-score: 0.085
Wang D, Nitta R, Morikawa M, Yajima H, Inoue S, Shigematsu H, Kikkawa M, Hirokawa N
eLife (2016) 5 [ Pubmed: 27690357 DOI: doi:10.7554/eLife.18101 ]
Structural basis of backwards motion in kinesin-14: minus-end directed nKn664 in the AMPPNP state
Resolution: 6.6 Å
EM Method: Helical reconstruction
Fitted PDBs: 5hnw
Q-score: 0.139
Yamagishi M, Shigematsu H, Yokoyama T, Kikkawa M, Sugawa M, Aoki M, Shirouzu M, Yajima J, Nitta R
Structure (2016) 24 pp. 1322-1334 [ Pubmed: 27452403 DOI: doi:10.1016/j.str.2016.05.021 ]
Rigor myosin X co-complexed with an actin filament
Resolution: 9.1 Å
EM Method: Helical reconstruction
Fitted PDBs: 5kg8
Q-score: 0.212
Ropars V, Yang Z, Isabet T, Blanc F, Zhou K, Lin T, Liu X, Hissier P, Samazan F, Amigues B, Yang ED, Park H, Pylypenko O, Cecchini M, Sindelar CV, Sweeney HL, Houdusse A
Nat Commun (2016) 7 pp. 12456-12456 [ DOI: doi:10.1038/ncomms12456 Pubmed: 27580874 ]
Resolution: 6.6 Å
EM Method: Helical reconstruction
Fitted PDBs: 5hnx
Q-score: 0.138
Yamagishi M, Shigematsu H, Yokoyama T, Kikkawa M, Sugawa M, Aoki M, Shirouzu M, Yajima J, Nitta R
Structure (2016) 24 pp. 1322-1334 [ Pubmed: 27452403 DOI: doi:10.1016/j.str.2016.05.021 ]
- Taxol (853 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Tubulin alpha-1b chain (Complex from Bos taurus)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Minus-end directed ncd chimera nkn664 in the amppnp state complexed with gdp-taxol microtubule (Complex)
- Tubulin alpha-1b chain (50 kDa, Protein from Bos taurus)
- Tubulin beta-2b chain (49 kDa, Protein from Bos taurus)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Protein claret segregational,kinesin-1/kinesin-14,protein claret segregational (Complex)
- Protein claret segregational,kinesin-1/kinesin-14,protein claret segregational (41 kDa, Protein from Drosophila melanogaster)
- Tubulin beta-2b chain (Complex from Bos taurus)
Structural basis of backwards motion in kinesin-14: plus-end directed nKn669 in the AMPPNP state
Resolution: 6.3 Å
EM Method: Helical reconstruction
Fitted PDBs: 5hny
Q-score: 0.145
Yamagishi M, Shigematsu H, Yokoyama T, Kikkawa M, Sugawa M, Aoki M, Shirouzu M, Yajima J, Nitta R
Structure (2016) 24 pp. 1322-1334 [ Pubmed: 27452403 DOI: doi:10.1016/j.str.2016.05.021 ]
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Protein claret segregational, kinesin-1/kinesin-14, protein claret segregational (41 kDa, Protein from Drosophila melanogaster)
- Magnesium ion (24 Da, Ligand)
- Tubulin beta-2b chain (Complex)
- Tubulin beta-2b chain (47 kDa, Protein from Bovine)
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
- Protein claret segregational,plus-end directed kinesin-1/kinesin-14,protein claret segregational (Complex)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Tubulin alpha-1b chain (Complex)
- Plus-end directed ncd chimera nkn669 in the amppnp state complexed with gdp-taxol microtubule (Complex)
- Taxol (853 Da, Ligand)
- Tubulin alpha-1b chain (48 kDa, Protein from Bovine)